Perbandingan Ekstraksi Ciri K-Mers dan Spaced K-Mers pada Klasifikasi Fragmen Metagenome dengan Naïve Bayes Classifier
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Date
2013Author
Rahmawati, Viani
Kusuma, Wisnu Ananta
Haryanto, Toto
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Metagenome is a genetic material obtained from a simple which is taken directly from the environment such as soil, marine, or human entrails. These metagenome fragments contain a variety of organism , so that a binning process required to classify them before conducting genome assembly. This research employs naïve Bayes classifier (NBC) and spaced k-mers as a feature extraction to classify these fragments into genus level. The results will be compared to those of method which uses NBC and k-mers feature extraction. K-mers feature is a common feature in the DNA fragments classification problem. The comparison results show that the accuracy of classifier using NBC and spaced k-mers is higher than that of classifier using NBC and k-mers.
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- UT - Computer Science [2236]